Ivan Reveguk

Results 5 comments of Ivan Reveguk

> Would it be OK for you, if @tomtomhdx implements this functionality Sure thing. To complete the list of supported standard (macromolecular) polymers, @tomtomhdx could also add `filter_carbohydrates` implemented similarly....

I'll throw in an example for the `filter_polymer` function I suggested above. ```python import biotite.structure as bst from functools import partial def filter_polymer(array, min_size=2, pol_type='peptide'): """ Parameters ---------- array :...

> I think `filter_polymer()` has a good use case, especially if a certain minimum length is required. Could you open a PR? Did you already test this function, especially whether...

I've tested new functions, they work as expected. Thank you, @tomtomhdx !

Thanks, Lirong. Of course, evidently, the VQ-VAE model is _used_ for inference. So my question pertains to whether it has any actual _impact_ on ddG predictions. Because, you see, when...