Dakota Howard
Dakota Howard
Hey, Yes, I've noticed this and am working on resolving it. You are correct in the issue you tagged will resolve this problem as the pandera schema's will be used...
V1.2.0 now supports date formats: "YYYY", "YYYY-MM", and "YYYY-MM-DD"
Hey @SeanSierra-Patev, There seemed to have been a typo in the docker image that was causing that. I've update the docker image so that should resolve it. I also corrected...
Version updates have been added. Currently bug fixing/documenting - [x] Submission Test - [x] FLU - [x] COVID - [x] Documentation
V1.2.0 is out now
Hey @erikwolfsohn, thanks for contributing to SeqSender and incorporating enteric pathogens. I made a couple changes based on my review to fix certain issues I identified but everything looks good....
> > Hey @erikwolfsohn, thanks for contributing to SeqSender and incorporating enteric pathogens. I made a couple changes based on my review to fix certain issues I identified but everything...
> Hi Dakota, I just wanted to check in and make sure I didn't miss any emails from you. I was focusing on some other projects and this dropped off...
SeqSender V1.2.0 is currently out and now supports the One Health Enteric Package. Use the documentation to select the package to get the correct metadata and config file.
@donutbrew @leebrian The capitalization requirement has been present for those two fields since [v1.2.0](https://github.com/CDCgov/seqsender/blame/4cf34e3e95c321fbb7e6ff61598b8d2aa20858ff/config/genbank/genbank_src_schema.py#L189). This was also included in the [release notes](https://github.com/CDCgov/seqsender/releases/tag/v1.2.0) at the time. So, I think you might...