Andres Parada
Dear users, although I have experience with conda installations, this is my first time trying to install ete, when I check the install I got this error. ``` ete3 build...
Dear all, I am using Fedora 34, and while I was trying to install it I got this warning ``` libtool: install: warning: relinking `swig/perl5/mummer.la' src/AS_MER/merTrim.C:566:2: aviso: #warning ASSUMING SANGER...
**Describe the bug** I am following the first steps to recover abundance data from certain datasets, I couldn't execute this instructions https://waldronlab.io/curatedMetagenomicDataAnalyses/articles/MLdatasets.html **OR** https://waldronlab.io/curatedMetagenomicDataAnalyses/articles/identify_CRC_species.html I noticed this is similar to...
Dear users, I wonder if I can use deepBGC with metagenomic samples? In the paper describing the software it is mentioned as a useful tool for this kind of data...
Dear all, I noticed there is a similar issue here #42 and #25, but now I am trying to plot fviz_pca_indiv and the points appear with different size even supplying...
Dear developers, I have a brief question after running megahit I run prodigal for all my metagenomic samples (using the -meta flag) for using them in other analyses. Should I...
I am trying to understand something about the pipeline in order to scale up and run it over 16 metagenomes for which we have illumina and nanopore data. I think...
Dear all, I have a similar issue to #94 After subsetting and running Lefse I would like to use the _**plot_cladogram**_ function. I used this code. ``` smalltreatment
Following your Q&A I am trying to use Weighted ASTRAL - Hybrid (i.e. astral-hybrid) with the bootstrap gathered for my 3000 gene trees. > Q: I have gene trees with...