Thom Booth

Results 5 comments of Thom Booth

This is definitely doable! We can add getphylo and I have already written scripts for comparing trees and alignments. With a little tweaking I could formalise these scripts to produce...

As another thread mentioned, this might be a problem with your libsqlite. What version do you have installed? Also, just a hint, but you don't need to use 24 cpus...

Hi! So I did some more digging. The most reliable fix was to roll back to cblaster version 1.3.10. I'm not sure what was changed that broke the database creation...

So, I did a bit more digging with a colleague of mine and we discovered that this is a problem with genomicsqlite. Since, you don't actually need it to run...

There is another issue at play. The API is also preemptively cutting short the result. You can get around this by applying the patch and lowering the -hs or adding...