Denis Puthier
In the example below, the space argument is set to 'free'. We thus expect that heights of panels should vary. It seems they are fixed leading to rows with varying...
Currently there is an issue with multithreading starting with 3.9. Need time to check...
This PR was automatically created by Snyk using the credentials of a real user.Snyk has created this PR to fix one or more vulnerable packages in the `pip` dependencies of...
The gtftk get_tx_seq command don't find chromosome when additional info is present in fasta file:
At least for pandas and pybigwig.
In doc (section coverage): gtftk profile -D -i mini_real_tx.zip -g tx_classes -t tx_classes.txt -f bwig -o profile_tx -pf png -if example_07.png -w -nm ranging
... and should be fixed.
It would be interesting to create plugins to detect the various spicing events described in Hadas Keren, Galit Lev-Maor & Gil Ast (Alternative splicing and evolution: diversification, exon definition and...
This is in progress and will be part of the next libgtftk release.