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I've fixed the error I was getting, which was posted on another issue and referenced here. Here's the solution that worked for me: https://github.com/scverse/scanpy/issues/1916#issuecomment-1286404697

Hello, I am having a similar issue with `read_10x_mtx`, except my error is showing `Key Error: 1` and it is from 10X data we produced ourselves, do doesn't involve a...

I've figured out what was causing my error. The scanpy function to read in `features.tsv.gz` expects three columns: `['gene_symbols, 'gene_ids', 'feature_types']` Where 'feature types' is a text string like 'Gene...

identified cause of problem around ao.fasta not being generated. kalign is hardcoded as the default msa software at line 72 of ErrorCorrection.java kalign and kalign3 accept different paramaters, so with...

Hi Philip, Thanks for your development of Conga. I'm wondering if there is any update on making the tool work for mouse BCR data?