dmiyagi

Hi @t-neumann , I recently used Slam-Seq and we sequenced the results using Kappa Poly-A. We encountered the problem you have mentioned and got A>G increased instead of T>C on...

I just wanted to follow-up on this in case people are looking for an answer in the future with what we ended up doing to reverse complement the strands: `reformat.sh...

Hi @Hoohm if I am using TotalSeqB with just normal 10x V3, is the -n_cells still recommended? is 1.5.0 ready? Or is what you are saying only for multiomic? Do...

Hey guys, curious if this has been added? I am trying with `scprep.plot.jitter(clusters, ylim=(0,18))` and it isn't allowing me. Gives an error `AttributeError: 'PathCollection' object has no property 'ylim'`