David J. H. Shih

icon indicating a website link https://www.linkedin.com/in/davidjhshih icon indicating an email [email protected]

icon company University of Hong Kong icon location Hong Kong icon location Assistant Professor

Results 2 issues of David J. H. Shih

VCF coordinates appear to be 0-based instead of 1-based

The VCF output file appears to contain 0-based coordinates. As per the specification, VCF files should contain 1-based coordinates (https://samtools.github.io/hts-specs/VCFv4.1.pdf). (FYI: VCF also specify that "telomeres are indicated by using...

Fix compilation error on gcc 14.2

5 comment

R > devtools::install() Compilation error encountered with gcc 14.2: ``` In file included from gdal.cpp:1: ./gdal.h:3:1: error: ‘OGRSpatialReference’ does not name a type; did you mean ‘DEFINED_OGRSpatialReferenc eH’? 3 |...