dining-philosopher

Hello! I overcame this issue by adding chr* definitions to Homo_sapiens.GRCh38.dna.toplevel.fa.gz.fai : ``` 1 248956422 56 60 61 2 242193529 253105808 60 61 3 198295559 499335952 60 61 4 190214555...

Interestingly this is specifically vcf2maf issue, vep alone runs fine at the same file. Moreover, when i tried to convert such vep output to maf with vcf2maf, it gave me...

Here they are: [picard_examples.tar.gz](https://github.com/ewels/MultiQC/files/9478982/picard_examples.tar.gz) EstimateLibraryComplexity and MarkDuplicates generate slightly different data, i do not know why. Also i have to say that MultiQC confuses EstimateLibraryComplexity and MarkDuplicates outputs. > Hi...

Hello! I wrote a script to circumvent this error: ``` #!/usr/bin/python3 # makes Mutect2 output vcf compliant with VCF specification in case of AS_FilterStatus delimiters at multiallelic loci # ("wrong...

Why not simply allow F11 key? When i choose "full screen" from the menu, it works fine, at least in chromium. But F11 key is disabled for no apparent reason.