Daniel Golden
Daniel Golden
The database to be updated is the full GTDB_release207, and the sample TSV I'm trying to add includes ~4,000 genomes
> For your new ~4k genomes, are you using the taxids from https://github.com/shenwei356/gtdb-taxdump? We've just been using the NCBI tax IDs provided for each species in the JGI download data....
Would you happen to know if there's any additional documentation from gtdb-taxdump regarding how the tax IDs are generated? My experience with hashing is a little bit limited, and the...
Will do! Thanks!
Hi again! We've made some progress, but we're running into some additional issues. We have successfully generated the hashed GTDB tax IDs for our input genomes, but attempting the database...