Dan Fornika

Results 47 comments of Dan Fornika

I'm interested in this issue for the purpose of using the `Link` header for web linking. There's an [example](https://tools.ietf.org/html/rfc8288#section-3.5) in the RFC that shows multiple links being serialized either in...

Hi, I've also recently run into a similar error on v1.5.1. Last few lines of the log are: ``` 10:24:13.110 - INFO - ANNOTATION - fix product: replace domain name...

I'll collect that info and follow up as soon as I can.

I may be a bit slow to reproduce this and pass along more detailed info. But I can say that I was running bakta in the context of this pipeline:...

Incorporated changes from #1347 for more accurate read counts.

General Statistics section does not seem to be picking up values correctly: ![Screenshot from 2021-02-13 11-44-05](https://user-images.githubusercontent.com/145659/107859802-d5b63980-6df0-11eb-89d5-5a0cd6429128.png) ![Screenshot from 2021-02-13 11-45-59](https://user-images.githubusercontent.com/145659/107859827-11510380-6df1-11eb-91aa-5112bee9cdd5.png) Results generated using dataset from: https://github.com/ewels/MultiQC_TestData/blob/master/data/modules/bracken/v2.6.0/bracken_report.txt

Fixed! ![Screenshot from 2021-02-13 12-04-03](https://user-images.githubusercontent.com/145659/107860320-a94fec80-6df3-11eb-9941-d4c7dc54844e.png) ![Screenshot from 2021-02-13 12-04-27](https://user-images.githubusercontent.com/145659/107860327-ad7c0a00-6df3-11eb-9cf2-ae1a16f7a1f3.png)

Hi @ewels, no apologies necessary. I know there are a lot of modules in this project so lots to review & manage. It's been a while since I looked at...

I did touch base with Jen, just to double-check that not including Unclassified reads in the report was the intended behaviour for bracken. She confirmed that it was, and that...

Hi @ewels, I've done my best to incorporate your suggestions. I'm not well set up to test this thoroughly right now. If anyone might be available to help push this...