deyuanyang

How to make cirular map to linear?

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Hi, Meng, Sorry for disrupting you. MitoZ is an amazing soft, and I have derived much benefit from it. Can you add some functions to make a circular map into...

Sing end reads is ok?

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Hi, When I used Novoplasty to assemble my mtDNA data， some of my data was only one-direction data, and another was lost, I copy one-direction data as the other direction...

Hi Allio, It's a nice Soft. When I study the genes reorder in mt, I always need to check tRNAs annotation and combine three soft results ( MiTFi, ARWEN, tRNAscan-SE)...

Hi, Can I use this soft to draw my curated gb files? Yang

Would you mind providing a more detail on assembly ?

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Hi, It's a perfect soft. When I used it to assemble my data, I could not understand the --read parameter, if I have data like R1_fq.gz, and R2_fq.gz， how to...

A small suggestion

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Dear Philipp, It's a wonderful soft! When we build a phylogenetic tree, we often remove 3rd codon. Could you mind adding some optional like this? Best wishes, Deyuan

A bug apper， when log files in

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Hi, When I used BUSCO output files, an error was reported. If I remove log files, it is ok. Can you solve it？ (BUSCO_phylogenomics) cody@cody:/media/cody/de1ca27e-ece1-4202-86f5-b63ed873ebe9/Tere_results/tere/test$ BUSCO_phylogenomics.py -i ./ -o sss...

How to use pxcomp

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Hi, Could you please provide guidance on how to use pxcomp？ (base) cody@cody:~/Documents/Temp/ceshi_phykit$ /home/cody/bin/phyx/src/pxcomp -h Sequence compositional homogeneity test. Chi-square test for equivalent character state counts across lineages. This will...