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                                            cyouh95

[Microarray] Assertion fails in GENERATE_SOFTWARE_TABLE when data files are not compressed

`Array Data File Name` field in runsheet used to determine whether data files are compressed or not. Quoted commas cause issue in `splitCsv()` as described [here](https://github.com/nextflow-io/nextflow/issues/1102), but can be resolved...

[Microarray Affymetrix] Processed data protocol

List of supported organisms needs to be updated (e.g., "Caenorhabditis elegans"): https://github.com/nasa/GeneLab_Data_Processing/blob/90d6bb5d6a20d817fa17ac5cb0763d4f8f75966b/Microarray/Affymetrix/Workflow_Documentation/NF_MAAffymetrix/workflow_code/modules/POST_PROCESSING/GENERATE_PROTOCOL/resources/usr/bin/generate_protocol.sh#L31-L32