Cristina Tuñí i Domínguez
Cristina Tuñí i Domínguez
Hi! I was having the same issue as OP and installing the development version and then setting the height arguments worked perfectly for me. I was wondering if this version...
Hi! I was looking at the current state of the `outputs.md` file and saw that there are definitions and differences for all the `salmon` output files are already in the...
@ATVincent thank you for your workaround! I am having difficulties identifying where in the rsyinc_from_ncbi.pl should we paste your code. Should we just paste it at the end of the...
Thank you @ATVincent for posting here the full code to the modified script!
Hi! I came across this project and would also love to help/test it to make it work on Domino's Spain. I am not an expert on this kind of APIs,...
Hello! I came across this issue because I was searching for exactly this implementation, and I have a question before opening some PRs: I have not checked all the datasets...
@emeerdink testing
I think that this subworkflow would be ideal since it does the needed steps mentioned: https://nf-co.re/subworkflows/fastq_qc_trim_filter_setstrandedness/ It also works with the `ch_fastq` that we have created for the samplesheet
The samplesheet handling is done now using nf-schema. As we add input params (gtf, fasta, etc), we can also validate them using nf-schema
Hello! Thank you for reviving this, please go ahead and let me know if I can help with anything!