corkdagga

Results 9 comments of corkdagga

Hi, I am also having the same issue using the conda-installed version. Cheers, Paul

Hi, I am having the exact same problem as the first message. I am using both .gbff files created from Bakta or downloaded directly from NCBI (and have tried each...

I also saw some other posts with the same issue, these were either fixed with an updated version or I tried the suggestions but it did not work for me......

> I think this issue should not be closed, as the PR was not merged yet and I expect all users to be affected by this issue. It's really hard...

A small update: I do not seem to have the problem with cblaster version 1.3.18

I also just realised that I had the same problem. It seems to work correctly with quite short contig names but I had the same error when my contig name...

I am also having the exact same issue. I have 100 genomes and have a script to run through a loop. Some samples work fine but others get stuck, although...

Hi I also kind of got it working again. I switched to the tool unicycler which uses spades and this seemed to work fine. Although I couldnt use -meta within...