Laurel Cooper

Components of size should be part_of rather than Is_a children

6

The components of size (PATO:0000117); the terms for 1-D extent, 2-D extent and 3-D extent should all be should be part_of size, rather than Is_a children. Currently in PATO, length,...

plant gall morphology trait (TO:0003500): A multi-tissue plant structure morphology trait (TO:0000836) which is a quality of a plant gall (PO:0025626).

Following up from the discussion at the AgBioData Ontology WG meeting: Adding SoyBase Xrefs to TO terms with @maxglycine Be sure to use the most recent version of the editors...

We should include ENVO to the list of imports so we can incorporate the newly created "crop canopy" class

Issue with import files for GO and ChEBI

5

There is an issue with the import files for GO and ChEBI, as compared to the other import files being loaded into TO (PO, EO, PATO). The terms are lacking...

root length (TO:0000227) and child terms

2

Revised definition: root length (TO:0000227): Was: Average maximum length of the root of a plant in a study. Revised: A root morphology trait (TO:0000043) which is the length of a...

chemical stress sensitivity (TO:0000482) and child terms

2

Propose to rename 'chemical stress response trait' (TO:0000482). was: Response by the plant in terms of resistivity or senility to chemical stress. Revised definition: An abiotic stress trait (TO:0000168) which...

Propose changing the label on the NCBI top level term to 'NCBI root'

7

In the Planteome project, we have found an issue since the NCBI top level term is called "root" and it conflicts with our PO term root (PO:0009005) in Protege, and...

Leaf production stages (PO:0007133)

1

The children of leaf production stage (PO:0007133) are described as "one leaf visible, two leaves visible" etc, while the definitions describe the number of nodes with leaves visible. Suggest renaming...

bracteole (PO:0009043) Current Def'n: A small leaf or leaves borne singly or in pairs on the pedicel, the prophyll(s) of the flower-shoot (pedicel plus flower). Source: APweb:Glossary It is a...