Connor McCoy

The previous version (0.6.3) fails to build on recent OS X. However, the latest ocaml-gsl has moved to a packed module: `Gsl_vector` is replaced by `Gsl.Vector`, for example. This PR...

described offline

Move Online_calculator node de-registration to Deleter

1

Discussed offline

Following up on the discussion of d87c6ff8e561ff1afc6ffe212570b3a64a6e7750

Currently we're starting the likelihood calculation fresh for each tree. This probably doesn't hurt much when starting from the MrBayes posterior, but will be inefficient after resampling.

`sts-online` assigns a substitution model and rate distribution to each particle, but there's nothing to: - Determine the model used - Read parameters for the model from a posterior trace...