Camille Maumet

ds000001 example processed with SPM

10

This PR includes an example of BIDS-derivatives dataset: ds000001 processed using SPM (using code available in https://github.com/NISOx-BDI/Software_Comparison/tree/bids_derivatives). This dataset will be used as an example use-case for BEP028 (provenance) ---...

Prefixes (Namespaces) for alphanumeric identifiers not passed to turtle serialisation

4

Hi @satra, @trungdong, I am trying to use `Namespace` to specify prefixes for our alphanumeric identifiers and though this works fine with provn, it can't get it to work with...

Excursion set not displayed in NIDM-Results collections

15

Hi, @satra reported that the excursion sets are not displayed for the NIDM packs in this collection: https://neurovault.org/collections/1425/ For example, with https://neurovault.org/collections/1425/pain_01.nidm , we get a red message saying "There...

NIDM-Results pack without Neurovault's URLs for images

1

Hi NeuroVault team, With @TomMaullin, we have noticed a possible bug on one of our NIDM-Results packs stored on NeuroVault. The local paths in the following turtle document have not...

DataTables warning when trying to show "100 entries"

19

Hi, Looking at http://neurovault.org/collections/1692/ and clicking on the dropdown menu to show `100` entries (instead of `7` by default), I get the following message: ![screen shot 2016-09-19 at 11 08...

As discussed with @gllmflndn on July 24th, here is the rationale to implement BIDS-Prov in SPM. The BIDS-Prov export will be obtained by adding a new call to `spm_jobman` with...

Import all definitions into main `nidm.owl` file

3

From [NIDM call on Sept. 11th, 2017](https://docs.google.com/document/d/1IFaMH2C3IBkXqTUJp9ge3By9Sk8v7SWCJEz93NkY_gY/edit?usp=sharing): - We need to write a script to copy all the definitions from the imports directly into https://raw.githubusercontent.com/incf-nidash/nidm/master/nidm/nidm.owl so that we can view...

Create a JSON-LD context file that can be reused across NIDM-Results documents

4

As suggested by @satra, it would be nice to create a [JSON-LD](https://json-ld.org/) context file listing our preferred prefixes available in https://github.com/incf-nidash/nidm/blob/master/nidm/nidm-results/terms/prefixes.csv. This context file could then be imported by any...

Retrigger tests with cast removed from nidmresults library

4

This a companion PR to https://github.com/incf-nidash/nidmresults/pull/59. To retrigger the tests and check that removing the cast as suggested by @khelm does not cause backward compatibility issues.

Can we encode used and wasDerivedFrom relations in owl file?

11

This issue is a follow-up on the discussion started in NIDASH call on Oct 27th ([minutes](https://docs.google.com/document/d/1g9IngKm8NNyWBUa5VOmx4pCjv_EXC3Zf0Mlv9Q4LCmU/edit?usp=sharing)) regarding how to encode constraints on the prov relations in the owl file (typically...