Dexiong Chen comments

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                                            Dexiong Chen

Question about Eq. (4) in the paper.

Hi @xiyiyia In "GraphiT: Encoding Graph Structure in Transformers", my co-authors and I used the kernel smoothing formulation introduced in https://arxiv.org/pdf/1908.11775.pdf, originally proposed for NLP. We generalized the formulation to...

otk_kernel

Hi, OTK embedding can be used to replace the global pooling layer in a network. The performance depends on your task and it generally works well on datasets with long...

How to process the raw data

Hi @luoxiao12 The data we provide is raw data but not preprocessed. You can use the `load_graphdata` in `gckn/data_io.py` to load graphs from the TuDataset.

can't find "dynamic_pooling" in gckn

Hi @Hanmii Did you follow the installation steps in README to install GCKN?

ModuleNotFoundError: No module named 'gckn.graphs.graphs_fast'

Hi @jjwwno Did you run `make` to install our package, following the instructions in the installation section?

ModuleNotFoundError: No module named 'gckn.graphs.graphs_fast'

Sorry that this package is not maintained anymore, so it's possible that it doesn't work with the latest versions. Could you try the following versions (In particular, I believe the...

ModuleNotFoundError: No module named 'gckn.graphs.graphs_fast'

This work was done 4 years ago with the latest compatibility updates 2 years ago during my position at my previous institute. And unfortunately, I don't have the original environment...