chuynh96

>head(cbind(fnFs, fnRs)) fnFs [1,] "/Users/mai/Desktop/Bioinformatics Stuff/Lung2/SRR12264494_1.fastq.gz" [2,] "/Users/mai/Desktop/Bioinformatics Stuff/Lung2/SRR12264495_1.fastq.gz" [3,] "/Users/mai/Desktop/Bioinformatics Stuff/Lung2/SRR12264496_1.fastq.gz" [4,] "/Users/mai/Desktop/Bioinformatics Stuff/Lung2/SRR12264497_1.fastq.gz" [5,] "/Users/mai/Desktop/Bioinformatics Stuff/Lung2/SRR12264498_1.fastq.gz" [6,] "/Users/mai/Desktop/Bioinformatics Stuff/Lung2/SRR12264499_1.fastq.gz" fnRs [1,] "/Users/mai/Desktop/Bioinformatics Stuff/Lung2/SRR12264494_2.fastq.gz" [2,] "/Users/mai/Desktop/Bioinformatics Stuff/Lung2/SRR12264495_2.fastq.gz" [3,] "/Users/mai/Desktop/Bioinformatics...

I got this error: > nseqF

I removed that fastq file (both forward and reverse) and it ended up working. Thank you for helping me troubleshoot this!