Cheng-Hung Tsai

icon indicating a website link https://chtsai0105.github.io

icon company University of California - Riverside icon location Riverside, US icon location Bioinformatics PhD candidate at UC Riverside

Results 3 comments of Cheng-Hung Tsai

Not working on Arch distro

Confirmed the issue still occurred when using bash on Arch. ![image](https://user-images.githubusercontent.com/30458683/132141748-01901a4c-7357-44b4-a93e-8448be4663d0.png) Check smartcard status on bash ![image](https://user-images.githubusercontent.com/30458683/132141756-a10a29bc-011b-4f60-9c4c-b0b03b1cda63.png) ![image](https://user-images.githubusercontent.com/30458683/132141763-cef20735-5831-4e92-9639-ccabcdf5a53e.png)

dbcan_sub will create tons of subprocesses

Hi - I reviewed the codes and made some changes that allow user to use hmmsearch instead of hmmscan. I've sent a pull request and you can see the details...

Having too many short contigs

Maybe I was not totally right. There are tons of contigs shorter than 1000 bp, especially around 125 bp. ![image](https://user-images.githubusercontent.com/30458683/236356228-2f6aa211-1347-4fd9-9d85-fc9772b2a89d.png)