Charalampos Lazaris
Charalampos Lazaris
Spike-in normalization would be a very useful addition. @nservant has written a Nextflow pipeline which provides this feature in addition to others (https://github.com/bioinfo-pf-curie/ChIP-seq). I am testing it at the moment...
Hello @cjfields, this is what I see too. We should probably have a Zoom call to see what the best options are. My time zone is EDT. What is the...
@cjfields this is a good idea. Please, feel free to start the discussion there but include @nservant in addition to @JoseEspinosa and @drpatelh, as he was the one who developed...
Hello @nservant and everyone else interested in spike-in normalization. Since, you have already worked on a version of the ChIP-seq pipeline with spike-ins @nservant, I am wondering what could be...