Chaoran Chen

Hi. I was just wondering how you are prioritizing this issue. Do you plan to fix it any time soon?

@corneliusroemer, if you open the "GISAID list" from CoV-Spectrum, it is already randomly sorted (note that the URL contains `orderBy=random`). I.e., you just need to take the first n rows...

Hi Emma! Thanks for creating this file, I believe that it will be very useful! > - Is phylogenetic_defining useful? or just leave it? I don't have a concrete usecase...

@emmahodcroft I would like to change my previous answer: having the colors field could be useful for me/cov-spectrum. It might be a good idea to use the same colors as...

Sure, I reduced it to 400. Please let me know if I should increase it again.

@corneliusroemer, but the cov-spectrum website now generates links with limit=400, right?

Hi @joverlee521, thank you very much for pinging me! I don't use the `reverse` column.

Looking at CoVariants, my understanding is that you could, for example, define 20I as `B.1.617.2* & S:A222V` and 20J as `B.1.617.2* & N:G215C`. There are two different ways to query...

By the way, (rudimentary) support for Nextstrain clades already exists. Here are the Nextstrain clades that have `B.1.617.2*` as pango lineage: [https://lapis.cov-spectrum.org/open/v1/sample/aggregated?fields=nextstrainClade&pangoLineage=B.1.617.2*](https://lapis.cov-spectrum.org/open/v1/sample/aggregated?fields=nextstrainClade&pangoLineage=B.1.617.2*) And here are the nucleotide mutations of 21J:...

@FedeGueli, yes, you're right. I was just reading https://covariants.org/variants/21I.Delta and thought that S:A222V is specific to 21I. But as I now also see from the following link, that's not the...