Liang-Bo Wang

On mac arm64 (m1 pro), I got the same error that the extension was not available after running `make`: ```text ./build/release duckdb -unsigned D LOAD 'build/release/extension/sqlite_scanner/sqlite_scanner.duckdb_extension'; ================================================================================ IO Error: Extension...

I was able to create the duckdb extension with #11. `make test` on mac arm64 now passes all the tests as well. Awesome! Thank you for the quick fix 🎉...

The bioconda version of cyvcf2 links to the conda-wide htslib, which implements the file access using different protocols (HTTP, AWS S3, and etc). This conda-wide htstlib compiles all the supported...

Meanwhile, you can try to build cyvcf2 and htslib locally following the [README's instruction to install from GitHub source][install]: ```bash git clone --recursive https://github.com/brentp/cyvcf2 cd cyvcf2/htslib autoheader autoconf # See...

Regarding the conda-based installation, an easy way to test if this issue is related to cyvcf2 is to install bcftools in the same environment, since both of them links to...

Hi @alanwilter, I created a private S3 bucket and put your test file there. I was able to access the private S3 file. I think this is an issue regarding...

I spent my whole morning testing this, and I found a related bug on htslib 1.11 (either from bioconda or compiled from source ), where none of the htslib plugins...

I don't think cyvcf2 has changed a lot between v0.11.6 and v0.30.4 except that the former version uses an older htslib (1.9 vs 1.10). If you cannot use conda and...

I got it working by changing the configuration of htslib (changing only one line of your Dockerfile): ``` ./configure --enable-libcurl --with-libdeflate --enable-lzma --enable-bz2 --enable-gcs --enable-s3 ``` The culprit here is...

Here are some of my questions to help the diagnosis: - how did you install the package? pip or conda? - did you encounter any error message during the installation?...