Charles Coulombe
Charles Coulombe
Support running from a virtual env. as a script. Include run_alphafold.py and download scripts as well. Bundle all scripts inside a wheel. This ease distribution and lets a user install...
Include FlexiBLAS as available vendor. Find BLAS libs to link on Flexiblas.
When installing in a virtualenv, then running `chiron -h`: ``` File "~/Chiron/.chiron/lib/python2.7/site-packages/chiron/chiron_input.py", line 23, in import utils.progress as progress ImportError: No module named utils.progress ``` Fixed this import error.
As of v0.6.0 - List the required build deps : (cmake>=3.18, Catch2, Eigen, pybind11) - List the build steps This should be documented in the Readme and website. Suggestion :...
Blas and Lapack can have different provider (OpenBLAS, MKL, Flexiblas). Do not hardcode the libraries name but rather find them. Same for libpng, find it. Also uses `python3-config` from PATH...
Version 1.4.4 and 1.5 are affected. Building `htslib.a` on a system that provide libdeflate ends up with an import error: ``` ImportError: virtual_envs/medaka_v1.4.4/lib/python3.8/site-packages/libmedaka.abi3.so: undefined symbol: libdeflate_crc32 ``` A quick solution...
Hi, Any plan to address these would be appreciated: Make proper release versions 1) Tag and release on Github with Semantic versioning: https://semver.org 2) Provide instructions to install the code...
When compiling, such vendored files are conflicting. It is best to ask for the dependencies such as boost to be fulfilled on the system where the software is built. For...
### Describe the feature When `TORCH_CUDA_ARCH_LIST` is set, allow gpu build to succeed by not searching for a device and resulting in ``` RuntimeError: No CUDA GPUs are available ```...
Shield import when Open3D was not built with GUI.