Christoph Langer

icon indicating a website link www.christophlanger.com

icon company IMBA - Institute of Molecular Biotechnology of the OeAW icon location Scientist interested in bringing computer science, software development, and agile project management best practices into life sciences.

Results 1 issues of Christoph Langer

KeyError: 'chrom' using your docker for 'hint tl' with cooler input

2 comment

Hi, I tried to use your docker on coolers files: ``` $ hint tl -m out/wtg2nolabelfc1_1000kb.cool,out/wtg2nolabelfc1_100kb.cool --chimeric out/wtg2nolabelfc1_chimeric.sorted.pairsam.gz --refdir data/hg19_SNPs --backdir backgroundMatrices/hg19 --ppath /miniconda3/bin/pairix -f cooler -g hg19 -n test...