catubc

Cell quality from Suite2p (Cell order by SNR, classifiers etc)

1

Hello We have been using Suite2p at the lab for a while and it's great. We were wondering a bit about the cell export order as it seems to generally...

Hi guys Thanks so much for this great pkg. I ran it on some of my lab data, and the results are quite poor: https://drive.google.com/file/d/1yG-yn4AfehgxmMQvCeRfvxN8UGJNb84Z/view?usp=sharing Any advice is appreciated. Thanks

Fortran porting/implementation: suggestions

2

Laurens (and anyone else) I've got a stupid question: we're stuck with some very complex Fortran code for neural recording analysis. Basically we can't really write the fortran suite from...

DCN compliation problems

8

Hello This version of DCN wouldn't compile for me (errors right away): https://github.com/CharlesShang/DCNv2 ``` (CenterTrack2) cat@cat-GF63-Thin-9SCX:~/code/CenterTrack2/src/lib/model/networks/DCNv2$ ls dcn_v2.py __init__.py LICENSE make.sh README.md setup.py src testcpu.py testcuda.py (CenterTrack2) cat@cat-GF63-Thin-9SCX:~/code/CenterTrack2/src/lib/model/networks/DCNv2$ ./make.sh running...

Need description of YASS generated output for phy2 GUI package.

Need better description of YASS output files in yass-wiki.

Bigtiff (>4GB) support: "TIFFWriteDirectorySec: Maximum TIFF file size exceeded"

3

Hi. Is there a way to install/compile/flag libtiff to support > 4GB files? Thanks, catubc

Hi We are trying to install SLEAP using this command: `conda create -n sleap_env -c defaults -c sleap sleap python=3.6 -y` After downgradting tensorboard to 2.0.0, we get the error...

Searchsorted dependency not installing w. GCC

1

Hi Thanks so much for writing this, much needed. However, I am unable to install the torchsearchsorted extension due to some gcc version incompatibility. Do you have any insights/experience with...

Any extension planned to simultaneous multiple time series forecasting?

1

Hello This is an amazing package, thanks so much. We have datasets that have > 1 time series that we'd like to building models from. For example, instead of 1D...