Casper W. Berg
Casper W. Berg
Effective sampling without the need to invert the hessian. Automatic standardization and decorrelation would be nice (Gaussian processes only). Nice if it would work for both process error and observation...
First example in documentation does not work (missing constructor). It works if this line: AR1_t f1(phi1); is replaced with AR1_t f1 = AR1(phi1); Constructor should be made or example corrected.
When stdevfac's are used without rescaling to mean 1 implies priors on variance parameters means something different, for example if stdevfacI is a vector of 2's then the estimate of...
Predicted catch and uncertainty not showing for missing values - it just connects the lines for the non-missing values which is wrong. Example: library(spict) data(pol) inp
Plots of multiple runs such as leaveout runs with long fleet names makes legend unreadable. Possible solution: truncate names to a maximum number of characters that fits into a plot.
catchplot function shows the unscaled catches when catch multiplier is turned on. better option would be to show both the scaled and unscaled values in that case.
missing number in keyLogFsta (e.g. 0 1 3 4) causes segfault missing number in keyCorObs causes non-positive definite Hessian also check that obsCorStruct code matches numbers/NAs used in keyCorObs
setup.sam.data should check that number of years and ages match what is expected ala stockassessment.org datavalidator