Carolina Heloisa de Souza Borges

Trio mode: hybrid in HIFI + parents in Illumina, resulting in assemblies with high duplication levels

6

Hello @chhylp123 I used hifiasm in trio binning mode using Illumina reads from the parents and HiFi reads from the hybrid. The resulting assemblies (hap1 and hap2) have high duplication...

Trio binning - 1 mother 2 possible fathers

2

Hi, I´m using the Trio Binning strategy on a hybrid fish species. I know the ID of the mother, but I have two possible fathers. I´m thinking of mixing the...

Trio binning: parents (Illumina) + hybrid (Hi-Fi). How can I check parenthood?

1

Hi Thank you for developing this amazing tool! I have trio-binning data of a hybrid fish: Illumina data from mother and father and Hi-Fi data from the hybrid. I am...