Carlo Sala Frigerio

In case this is still of interest: mitochondrial genes do not have introns, so no Velocyto-type analysis can be done on these genes.

@timlai4 I am not familiar with specific datasets (e.g. the one you are using or the one referred to by the OP), my observation was more general in nature (i.e....

Hello @giovp , I have a similar issue (on squidpy 1.2.4.dev2+g1397d11): --------------------------------------------------------------------------- KeyError Traceback (most recent call last) Input In [2], in () 1 nanostring_dir = Path().resolve() / "Spatial_platform_evaluation" 2...

Hi @giovp , thanks for checking this. I have tried with two freshly made condaenvs, one with `pip install 'squidpy[interactive]'` and one with `pip install git+https://github.com/scverse/squidpy@main` I have the same...