Camiel Mannens

Installation requirements

2

Hi, I'm very interested in using your Graphical Lasso implementation due to the possibility of adding a matrix penalty (not included in sklearn). However, I'm having some issues installing the...

Hi @diazlab and @soerenmueller , I'm trying to recreate the CONICS analysis for [this paper](https://cancerdiscovery.aacrjournals.org/content/9/12/1708), in particular for the scATAC-seq samples. Like in the paper I'm using log2(CPM/10) for the...

I just ran into this same issue (https://github.com/aertslab/pycisTopic/pull/158) running single_cell_toolkit as part of the PUMATAC pipeline. In short, when using genomes with inconsistent string/integer chromosome names polars can incorrectly infer...