bug1303

I had the same issue, but I found `sam.h` file inside `./htslib/htslib` folder. Inside `src/fqheader.h`, I changed the include statement from `#include ` to `#include "htslib/sam.h"` then I could run...

Hi @vokuryshev Try to add the folder rather than the file: `export LD_LIBRARY_PATH=/usr/local/lib` This fixed it for me.

I had the same issue, using GenomicFeatures v 1.34.3 (not sure which other packages/versions might be relevant for this). It appears that genes(), transcripts(), and promoters() return a GRanges object...

New user here as well, who has been fighting with the same issue last week. I think there is currently no way around sample/job-specific work dirs for kvdb/reads/out, but you...

This would be a nice usability plus, which would possibly increase the user base. As long as this is not supported, is there anything wrong with using `MySCE = as.SingleCellExperiment(MySeuratObject)`?

A colleague got the same error, we checked the known suspects ``` stopifnot(all(is.finite(ranked_genes))) stopifnot(!any(is.na(names(ranked_genes)))) ``` Then I found that there was one gene without name/empty string "", and that this...

I had the same issue with too many snap processes that exhausted system memory. I managed to limit the number of snap processes spawned by using a higher -l, so...