brendanf
brendanf
I downloaded the SILVA LSU database to use as a reference, and I'm trying to cut it at the location of the 3' primer I am using in my study....
``` library(ggplot2) library(ggforce) ggplot(iris, aes(Petal.Length, Petal.Width, colour = Species)) + geom_point() + geom_vline(xintercept = 4) + facet_zoom(xy = Species == 'versicolor') ``` `Error in scale_index[[i]] : subscript out of bounds`...
I'm working on packaging `nimble` for [conda-forge](https://conda-forge.org/), and I have a couple questions: 1. Does anyone from the dev team want to be added as a [recipe maintainer](https://conda-forge.org/docs/maintainer/adding_pkgs.html#maintainer-role)? For R...
It looks like the conda-forge package for `fst` has not been able to successfully build on OSX since they [upgraded their dependencies back in July](https://github.com/conda-forge/r-fst-feedstock/pull/5#issuecomment-513542114), and there isn't any action...
My package implements some S3 methods for classes which are defined by packages in Suggests. Before using those packages in the methods, I check for the presence of the relevant...
There seems to have been a reversion sometime since [this Stack Exchange answer](https://stackoverflow.com/a/37953308/7318214) was given; now when I make a new package `hello` using `hello/R/hello.R`: ``` #' hello #' #'...
For use in the [inferrnal](https://github.com/brendanf/inferrnal) package. The requirement is also available for OSX oh homebrew, but requires tapping a keg: ``` brew tap brewsci/bio brew install infernal ``` Is there...
I'm using `future.batchtools` via `drake`, and just got my first plan running on the cluster. It seems to take about one minute for each job submitted, and since I'm trying...
I don't think you're involved with the recipe for Pasta on Bioconductor, and of course you are under no obligation to support that install method. But I thought I would...
I am testing edlib for the purpose of calculating pairwise identites between sequences, using the BLAST/USEARCH definition of sequence identity; i.e. $\text{id} = \frac{\text{edit distance}}{\text{alignment length}}$. One difficulty I am...