blex-max
blex-max
You have no idea how much hassle you've saved me! Thanks a lot!
I just wanted to double check the function of the `-v` flag - does it specify the version you want to change to, or the version you want to change...
We could also do this on a local fork if it's preferable - any pointers to the appropriate code would be much appreciated.
I (pending review) have solved my own issue by writing a bash wrapper for bcftools that handles passing a file to -i/-e amongst other things, but I'll leave it open...
@tobiasrausch > the input trace qualities are not very useful This piqued my interest, would you mind expanding on it a bit? In my department, one of the concerns I...
It seems convoluted (and computationally slow) to me to basecall the sequence, check the length, then use that length to feed into basecalling the same sequence again - but I...
But to be clear I do still think it would be useful to have this be an internal feature
Just to add, I've also been wondering about this!
@tobiasrausch forgive me for pinging you, but are you intending to respond to this?
Is this likely to change? As @nriddiford says, it seems a shame to have a 50% chance to incorporate a low quality base when the information is available to make...