biojiangke
biojiangke
Running BCFTOOLS and BGT for the same region, BCFTOOLS showed two SNPs but BGT (bgt built from the same vcd.gz) returned none. Not sure how widespread this problem would be....
Hi, megadepth has been a great tool! Thanks for the excellent utility! One question: is there an option to include a scaling factor when converting BAM to BigWig? Both UCSC...
It seems that BGT does not work with joint called variants by DeepVariant/GLNexus process, when run import, it gives this error: `[W::vcf_parse1] FORMAT 'RNC' is not defined in the header`...
Running the example in the tutorial (https://rdrr.io/bioc/InterMineR/f/vignettes/Enrichment_Analysis_and_Visualization.Rmd) does not work any more after upgrading bioconductor to 3.13. It throws out the following error: ``` Error in (function (classes, fdef, mtable)...