Budhaditya Basu

icon indicating a website link https://bio-visualisation.github.io/bio-quarto/ icon indicating an email [email protected]

icon company University of Iowa icon location Iowa City, IA, US icon location Molecular Biologist🧬🐁🔬🧫. Love to code in #rstats

Results 3 issues of Budhaditya Basu

Dependencies and versions critical for successful running of pyscenic

2 comment

Can anyone summarize what are the dependencies and versions critical for successful running of pyscenic. I have tried most of the methods described in the issues section by double checking...

Preparing Count-matrix

Hi, I am trying to use single cell data taken from GEO accession no: GSE137804 for training. I have few doubts. Please help. 1. May I directly use the processed...

Error in grid.Call(C_textBounds, as.graphicsAnnot(x$label), x$x, x$y

2 comment

Do you have any idea why I am getting this grid.call error while running `DynamicPlot()` and `DynamicHeatmap()` `DynamicPlot( srt = cortex, lineages = c("Lineage3", "Lineage7"), group.by = "Hes_Exp", features =...