BIO-RAT

Results 4 comments of BIO-RAT

Segmentation fault

I didn't remember what I did exactly but I followed this https://github.com/gcorso/DiffDock/issues/180#issuecomment-1964293481

Feature Request: Add --save_msa flag to export MSA files

Kinda related question is that I figured out how to calculate custom MSA but I wonder how do you deal with template? Usually colabfold server handle that part but Boltz...

when I use GPU to accelarate colabfold_search , it slower than colabfold_search by using cpu

How that went for you? I noticed that the setup_database.sh from colabfold script doesn't include `mmseqs makepaddedseqdb`. Does that affect performance?

when I use GPU to accelarate colabfold_search , it slower than colabfold_search by using cpu

I have good news today. After running the stock setup_databases.sh script and running the colabfold_search with --db-load-mode 2 and gpu server also with --db-load-mode 2. I was able to query...