billytcl

Results 25 issues of billytcl

I'm at a loss of how to do some basic math and logic in SparklyR (v1.7.5, R 4.1). My actual table is ~60M rows x 600 columns, with values like...

bug
blocked

Just in megalodon, where you can pass custom settings to guppy, it would be nice to be able to pass custom mapping settings to minimap/mappy. For example, for things like...

I'm running megalodon 2.4.0 with guppy 5.0.16 and I got this error in the middle of one of my runs: ``` [2022-05-03 20:26:29.855705] [0x00007f4ffb454700] [info] Connected to server as ''....

R 3.2.5 Installing from devtools gives me this error: > Installing BiocParallel > '/usr/lib/R/bin/R' --no-site-file --no-environ --no-save --no-restore --quiet CMD \ > INSTALL '/tmp/RtmpBv2SbE/devtools881174ee69a1/BiocParallel' \ > --library='/home/billylau/R/x86_64-pc-linux-gnu-library/3.2' --install-tests > >...

As far as I can tell, I can use Bonito with PromethION runs. Is there an equivalent rerio model for guppy?

## Description I am using the current version of lightGBM from CRAN, and cloned the github repo on Sept 1 for the CLI. FWIW I've only been using lightGBM since...

Hi there, I'm going to be working with some really giant matrices (~millions of rows x thousands of columns) that play nicely with bigmemory. Do you have any guidance on...

Looking at a few cfDNA samples across different runs, we've noticed instances where the meth_qual distribution can vary widely quite a bit. Eg. some samples are strongly piled up near...

**Bug Report Checklist** - [x] I provided code that demonstrates a minimal reproducible example. - [ ] I confirmed bug exists on the latest mainline of AutoGluon via source install....

bug: unconfirmed
Needs Triage
module: multimodal

### Feature request Load_dataset from a folder of images doesn't seem to support soft links. It would be nice if it did, especially during methods development where image folders are...

enhancement