bbjy
bbjy
The normalized_adj in your article is normalized_adj_bi, and the normalized_adj in your current code is normalized_adj_single(), is it? Or do I misunderstand? Which type of the normalized adjacency used for...
Hi @xiangwang1223 , thank you for your work. Why do you set reg_loss as a constant to monitor the training phase. What's the aim or necessity to monitor? Why don't...
Hi, thanks for your work. I cannot find the validation data in your code and released data either. And what's the meaning of "the performance reported in our paper is...
Thank you for your reply! I also try to do that as you said with the Biopython-> pairwise2.align.globalxx() function to align the bound and unbound sequences. And I get the...
It is so kind of you! Since the LCS subsquence may not be unique, it may influence the result I got. I will check my code with reference to this....
I am also confused about how to apply the model to the real data. Has anyone solved the problem? Thanks.
@vidarmehr I also get 19081 proteins from the protein-protein network(bio-decagon-ppi), and 1317 side effects, not the same as mentioned in paper (1318). Is it the same with your parameters (number...
@vidarmehr I got it. Thank you so much for your reply.
I met this problem too. The accuracy at the first iteration is about 76%, but after 20 iterations, the accuracy is about 50%. I don't know why. Is this because...
> I found the "Segmentation Fault" happens in particular with `scatter_max` function. That's why gat.py, etc. failed. @jzhou316 I met the same problem. Do you know how to address it?...