Athul

Core Dump error while generating unitigs(Step 5)

4

Hi, I am doing a denovo assembling a nanopore data of R7.3 chemistry. At first I converted the fast5 to fasta using poretools. After that I followed the pipeline, for...

matrix files gets changed during 'Reading feature-barcode matrix'

1

Hi Team, Thanks for this amazing tool. **Describe the bug** I was trying to run scFlow on my dataset (Successfully ran test dataset!). But once it generates the 'sample_sce' folder...

Error while running count_errors.py

3

Hi, I am following the workflow you have given in error-profile.sh. Everything works perfect, and I use Ecoli data set. But on error pops up while running count_errors.py . `Traceback...

Interpretation of the qualpos

3

How to interpret the qualpos output. We are seeing so many + symbol in the plot.

Conversion to Fasta generates same read names

2

Hi, I converted fast5 raw reads to fasta using poretools. But I came to see so many reads with same read name again. Is there any options to change it?...

input file for methylation_plots.R make_emissions_figure

4

what is the input for `methylation_plots.R make_emissions_figure`

methylation_plots.R error

1

`methylation_plots.R make_emissions_figure panelA_file panelB1_file panelB2_file panelC1_file panelC2_file` While running methylation plot i am getting following error: `Loading required package: ggplot2 Loading required package: stringr Loading required package: data.table Read 101508979...