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It seems to be a problem with the Primary theme then (it works okay for me with Minimal). ________________________________ From: Huy Z ***@***.***> Sent: Thursday, June 30, 2022 6:40 AM...

Thanks @JordanMakesMaps So I have to make sure all of the un-labeled pixels are assigned to a background category and that this category gets a zero weight. So that means...

Thanks @JordanMakesMaps Regarding the patch size set to 512 in my case, I'm confused about what to change in the example notebook [here](https://github.com/qubvel/segmentation_models/blob/master/examples/multiclass%20segmentation%20(camvid).ipynb) because of the following statements and code...

Thanks, I've implemented the size suggestion. This is the error I get after using 512 size parameters and the (None, None, 3) as you suggested. ``` Epoch 1/40 --------------------------------------------------------------------------- ResourceExhaustedError...

Thanks. Any ideas here anyone?

Would be great to have it. (I don't see upvote button)

@bsugerman I am using [drop2](https://github.com/biomedia-mira/drop2) registration for histopathology images but the outputs are deformation_field_x.nii.gz and deformation_field_y.nii.gz deformation fields which I would like to apply on the RGB png image channels...

Thanks

It worked for the query and download but not for the GDCprepare function. I ran ``` query

I also get the same error when running this example from the vignette: ``` > getProfileData(mycgds, c("MDM2","MDM4"), "gbm_tcga_mrna", "gbm_tcga_all")[c(1:5),] Error in read.table(url, skip = 0, header = TRUE, as.is =...