Ashley Shade

I think the original QIIME forum post was searching for an index of the specific mathematical definitions (or references to them) of all of the comparative diversity metrics. I am...

## Thank you! Ashley Shade, Ph.D. Michigan State University Microbiology and Molecular Genetics Biomedical Physical Sciences rm 6179 517-884-5399 tel:517-884-5399 ShadeLab http://ashley17061.wix.com/shadelab > On Jun 18, 2015, at 4:17 PM,...

Yoshiki suggested that I comment in GitHub that this would be a useful script to pursue. It would be great to have a script that would make an average (and...

Sure let me know how I can help Ashley Shade, Ph.D. Michigan State University Microbiology and Molecular Genetics On Dec 10, 2015 7:41 PM, "Luke Thompson" [email protected] wrote: > @rob-knight...

http://mbio.asm.org/content/5/4/e01371-14 http://www.cell.com/trends/microbiology/abstract/S0966-842X%2815%2900018-9 --- Ashley Shade, Ph.D. Michigan State University Microbiology and Molecular Genetics Biomedical Physical Sciences rm 6179 517-884-5399 tel:517-884-5399 ShadeLab http://ashley17061.wix.com/shadelab > On Dec 11, 2015, at 1:01 PM,...

Just want to reiterate - would love to contribute to this! let me know if and how we can!

The temporal component is key for the "blooming" interpretation. However, the algorithm is generic in that it could easily be applied over space instead of time, but then the interpretation...

Hi Luke, Awesome!! I am traveling but send the biom along with the metadata and I'll have a start as I am able. Ashley Shade, Ph.D. Michigan State University Microbiology...

O yeah and I think closed reference is best for this. Ashley Shade, Ph.D. Michigan State University Microbiology and Molecular Genetics On Jun 17, 2016 12:15, "Ashley Shade" [email protected] wrote:...