Arda Akdemir
Arda Akdemir
This is not a issue related to this github repository, but I wonder if you also had a similar error when basecalling on the Ecoli benchmark fast5 files: Fast5 read...
If I understand correctly, Sudachi is a lattice-based tokenizer and uses the occurrence probabilities and left-right probabilities (costs) for finding the best token sequence. We would like to know whether...
Hi! First of all thanks for this amazing library. It helped a lot to display QR codes on an OLED using Arduino. I have a question that might be too...
I would like to know if there is an already implemented way of running this program in multiples cores. Thanks in advance, Arda
Maybe this question is more appropriate as an email as it is not related mainly to the code on the GitHub but maybe someone else can also answer it apart...
Hey @jhyuklee. I have a question about the NER results. I obtained the datasets on the repository and each dataset is only annotated with the boundary information (B I or...
Dear authors, I was going over the code to prepare the input sentences for fine-tuning NER. The _read_data function I think has a small bug which makes the last sentence...
Hey ryan! I am trying to incorporate rebaler to my assembly pipeline as the minimap2-miniasm-racon does not generate assemblies for the v0.5.1 version of Chirons basecalls. Is there a specific...
We are using japsa tool to evaluate the accuracy of the basecallers. We would like to know why identity rate in japsa is defined as 1 - (mismatch + insertion)?...
Dear authors, I downloaded the dataset for Escherichia coli MG1655 https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR5219626 which says on the description that it contains the PCR amplified reads. Where can I obtain data for the...