Aaron Ragsdale
Aaron Ragsdale
Ran into the error pointing me to this issue. I am interested in this as well.
I'm thinking about this a bit more. Based on some recent discussion in the msprime Slack channel, I realized that the DTWF model also doesn't allow ancient samples to be...
Yes, I’d be happy to! On 24 Nov 2021, at 13:33, Jerome Kelleher ***@***.***> wrote: There's a note on it here. In principle it's simple - we just have...
This looks really nice to me. Agree that ancestry/mutations/output blocks makes a lot of sense, and those updates look clean. If I'm reading the changes correctly, you can place any...
Hi @simonharnqvist -- thanks for opening the issue. I believe everything is working as expected, and those missing population sizes and migration rates will appear as the populations come into...
To expand on the motivation here a bit: I don't think that the LD matrix vs scores vs decay represent different modes, in the way that branch/site/node are different modes...
Oh that’s true! I hadn’t thought of that. It would require being able to pass positions instead of site indexes but makes sense conceptually. Not sure if it’s high priority...
I wonder, would a better option be to warn instead of error if a zero position is printed, as suggested above? That avoids the breaking change, and instead a flag...
I guess I have a bit of a different view: that it's the user's responsibility to pay attention to warnings and understand input and output of functions, and generally a...
I meant to say, I'm happy to dig into this and open a PR with a fix. I think it will be pretty simple.