Alexander Peltzer

Results 90 issues of Alexander Peltzer

Hi @MikkelSchubert ! hope you're doing good - we're currently discussing a bit on how / whether AR2 is able to remove internal barcodes - is this currently supported (...

### Description of bug @ErikDanielsson - your latest bugfix fixed half of the low coverage issues we saw :-( Can we have such a defaulting to zero for all cases...

module: bug

Discussion schon auf Slack, aber hier zusammenfassung: Zeitrahmen: ``` "zeitrahmen": { 21 │ "einhalten_bei": "1", 22 │ "von_datum": "11.06.2021" 23 │ }, ``` Buchungs log: ``` 2021-06-09 18:52:18.585 impfterminservice [war]...

enhancement

## Description of the bug Running Sarek with `-r dev` and using a capture / targeted BED runs into trouble with ControlFreec. https://github.com/BoevaLab/FREEC/issues/106 for more context, @FriederikeHanssen knows about it...

bug

# nf-core/sarek feature request ## Is your feature request related to a problem? Please describe TMB / tumor mutational burden is a key metric for many oncology related projects and...

enhancement

### Description of feature Hi - especially @ErikDanielsson who worked on this I've given nf-core@dev another try and found most of the template stuff now nicely configurable. What is currently...

enhancement

Since we already insist on having people work on `dev` branches & `master` branches only incorporating stable code, we could also produce a way of making automated releases too: https://github.com/semantic-release/semantic-release...

low-priority
automation

Hi @brentp ! Thanks for the fantastic tool - would be great to have (similar to what igv.js and other tools do) a small example HTML available here in the...

Hi! Just an idea and maybe that was raised already in the past. At nf-core, we for example ask people to fill out a couple of basic things about the...

enhancement

Hi! a potentially interesting feature would also be the possibility to have a "local executor", e.g. a plain machine with required tools / software installed to run the workflow via...