anke-king
anke-king
### Setup I am reporting a problem with GSEApy version, Python version, and operating system as follows: ```python 3.9.18 | packaged by conda-forge | (main, Dec 23 2023, 16:36:46) [Clang...
I would like to train cell typist on different data sets. Should I merge the 2 data sets and train the model once or train 2 models and do the...
I use pip install harmonyTS and get the following error: Building wheels for collected packages: fa2 Building wheel for fa2 (setup.py) ... error error: subprocess-exited-with-error × python setup.py bdist_wheel did...
Im trying to install this package and get the following error: copying DP_GP/plot.py -> build/lib.macosx-10.6-x86_64-2.7/DP_GP copying DP_GP/__init__.py -> build/lib.macosx-10.6-x86_64-2.7/DP_GP copying DP_GP/utils.py -> build/lib.macosx-10.6-x86_64-2.7/DP_GP running build_ext skipping 'DP_GP/core.c' Cython extension (up-to-date)...
I get this error and it lists a number of genes that are not found in the data, although they are in var names (I checked). So I have no...
**Describe the bug** following your tutorial with own data: li.mt.rank_aggregate.by_sample( adata, groupby=groupby, sample_key=sample_key, # sample key by which we which to loop use_raw=False, verbose=True, # use 'full' to show all...
I tried running with the test data and got the following issue: K-mer analysis started... Traceback (most recent call last): File "/usr/local/bin/tandemquast", line 145, in main() File "/home/ubuntu/miniconda3/envs/flye/lib/python3.9/site-packages/click/core.py", line 1157,...
Hey, I have looked into the source code but as far as I understood it there is no argument which can be passed along to change the color of the...
Dear all, I have a very complex data set which underwent a couple of preprocessing steps, all in python (e.g. integration using scanvi etc.). From what I found there is...