Andrew Sanchez

You can pin your dependencies to specific commit. For example, using poetry: https://python-poetry.org/docs/dependency-specification/#git-dependencies

I've observed this as well. Browser: `Chrome Version 91.0.4472.114 (Official Build) (x86_64)` OS: `Mac OS Big Sur 11.4` Additionally, I _do_ see the annotations at `https://hypothes.is/groups//`, but there is a...

@Mikaio, it sounds like you may have overlooked the part of the docs that says: > aab needs to be run in an Anki development environment to work correctly. Please...

Neither downgrading with `conda install python=3.5` (resulted in 3.5.4) nor `conda install python=3.5.2` worked for me.

Quick fix is to patch it like so: https://github.com/healthvana/h2/commit/d67c6ca10eb7f79c0737c37fdecfe651307a7414

I spent a lot of time hacking together my own tool https://github.com/andrewsanchez/NCBITK @tseemann It works by making a subprocess call to rsync. Needless to say, I only recently discovered ncbi-genome-download....

I would like to begin work on implementing this. Any suggestions on how you could see this fitting in @kblin? Do you see it as simply being a part of...

I'm also interested in implementing an alternative human readable directory structure in the following format: ``` bacteria/ └──Abiotrophia_defectiva └── GCA_000160075.2_Abiotrophia_defectiva_ATCC_49176_Scaffold.fasta ``` I wonder if anybody else would prefer the above,...

I think at least one level of nesting can be removed. What is the value of placing the `fna` file under the `GCA_003741385.1` directory in the example below? `genbank/bacteria/GCA_003741385.1/GCA_003741385.1_PDT000396594.1_genomic.fna.gz` As...

@dutchscientist See my comment https://github.com/kblin/ncbi-genome-download/issues/15#issuecomment-322814530