Andrew McPherson

icon company @shahcompbio icon location New York icon location Computational Oncologist

Results 4 comments of Andrew McPherson

FileAlreadyExistsException thrown running blang

This issue exists on Mac when using the blang IDE download, not an issue for the blangSDK.

anndata initializer does not verify indices match on layers

Happy to try to fix and submit a PR given some advice on how to proceed

anndata initializer does not verify indices match on layers

Layers can be accessed in the same way as X for instance `adata[obs_indices, var_indices].layers['somelayer']`. This implies that the layers arent just the same dimension but they are aligned. However this...

anndata initializer does not verify indices match on layers

@ilan-gold , yes, exactly. The global indices are converted to integer like indices, which is how it should be. The anndata encapsulates a set of axes aligned objects but the...