Adrian Altenhoff

Avoid length limit for input fasta ids

1

The enforced length limit on the fasta IDs is annoying. https://github.com/DessimozLab/FastOMA/blob/38b299167435f16c781dfe065d96e184d6decf8d/FastOMA/check_input.py#L50 we could replace all the IDs with a lookup table. however, there are a few things to consider: -...

Hi, it seems that with ete4 the support to load phyloxml trees has diminished. nothing mentioned in the docs anymore, but the phyloxml module is still available. However, loading a...

[404] Link to "CI/CD integration" does not exist on https://nf-co.re/docs/tutorials/tests_and_test_data/nf-test_comprehensive_guide

1

**Describe the bug** broken link to [CI/CD integration](https://nf-co.re/docs/tutorials/tests_and_test_data/components/08_cicd_integration/) on https://nf-co.re/docs/tutorials/tests_and_test_data/nf-test_comprehensive_guide **To Reproduce** Steps to reproduce the behavior: 1. Go to https://nf-co.re/docs/tutorials/tests_and_test_data/nf-test_comprehensive_guide 2. Click on [CI/CD integration](https://nf-co.re/docs/tutorials/tests_and_test_data/components/08_cicd_integration/) - Integrating nf-test with...

- [x] Have you followed the [guidelines for contributing](https://github.com/brewsci/homebrew-bio/blob/master/CONTRIBUTING.md)? - [x] Have you checked that there aren't other open [pull requests](https://github.com/brewsci/homebrew-bio/pulls) for the same formula update/change? - [x] Have you...