SK

my csv file has features in rows and samples in columns. is there a way to transpose the dataframe in h2o R after reading it using importFile ?

Set align_flag=True yet correlation templates appear misaligned after register_multisession()

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Hi @epnev thanks for your response to my previous issue. i did set the align_flag to True but it does not seem to help, unfortunately. maybe i am missing something....

Shape and size of detected cells using quality parameters

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In order to tune the shape around the cell, that is the cell boundaries, i believe one has to tune the quality parameters below: ``` cnm.params.set('quality', {'SNR_lowest': 0.7, 'min_SNR': 6,...

Hello, I am trying to understand this codebase. Can you please provide proper references and documentation for understanding this codebase better ? For example, the code in correct_bidirectional_offset.m corrects phase...

Using pactools for resting state EEG

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Pardon me,this is more a research question than usage. I am trying to find differences in cfc between healthy and alzheimer's with little success.I am curious to know if phase...

Hi I have stacks of .tif dendritic images captured at some n levels (depths) of brain tissue on live animal. Can i use pTVReg for registering these images ? As...

Can you pl make this data available ?

Parallel image registration

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Hi I have almost 17000 frames to be aligned. I am wondering if pystackreg can registersuch images (using first frame as reference, let's say) in parallel ? Thanks

ZMQ msg len in push-pull socket is zero?

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I send a small image file in 1024 byte chunks from zmq server to zmq client over push-pull socket. I get most of the file but the last 9KB. On...

Hi, I have a matrix N*t where N is number of detected neurons and T is time. I am not sure how to set 'fps' in your code. Our frame...